Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792795.1_cds_XP_016514386.1_2605
CDS Infomation

[gene=LOC107831161] [db_xref=GeneID:107831161] [protein=coiled-coil domain-containing protein SCD2-like] [protein_id=XP_016514386.1] [location=join(11947..12354,12878..13050,13463..13538,13706..13747,13844..13906,14301..14350,14463..14490,14940..15014,15092..15202,15289..15349,16007..16123,16213..16331,16899..17000)] [gbkey=CDS]
Sequence

ATGGATCGGGCGAGAACAGCAAGTCCGAGGCAGTTAAGGAAATGGAGCAGCGAATCCGGA
GCAGCTCCGACTCTGACTTCCGGGTCTTCATCACCTGGACGTCCACATCATCATGGCCGG
TCTTCCTCAGTCTCCGGCGTCATGATGTCCAACATTAAGCGCACTCAGAATGTTGCTGCA
AAAGCTGCTGCCCAGCGCCTCGCTCAAGTCATGGCCTCACAAGCTGCTTCTGCTGGTAAT
GACGATGATGATGATGATAATGATGATCTTGGATTCCGATTTGCACCTCCCTCTTTTTCC
CGGTCCAACGGCACTAGTGCTACCGACAACACTAATGCTACCTACAACACTAATGCTGCG
GCTATTCAGTCCGCTAAGCTCAATAATAATAGATCATCTTCCCCTCTGCTAGCTAGGAAT
TTTGTCGAGGAAACCCCGTCGTCTCTTCGTTCAACATCAGCAGGAAGAGCAAATGTGCCA
ACTCGTCCTCCATCATCAATACCAAGTACCCGACAGCCTGTGAAGACTCCTTCACCTATA
CCCCCAATCGAGCCTCCAACCAACAAGCTGAGAGAGAAAAGATTCTCGCCAGATTTAAGA
CAAGTTAACTTGAAAGATACAGGAGATAACCGTGTTGCTTCTGCGCTTCATGATGAACTT
GATATGCTACAAGAAGAAAATGAAAATCTGCTTGGAAAGCTTAGAGGTGCTGAAATGAGT
TACGATGAAGCAGAAGCTAGAGTGAAGGAGCTTGAGAAACAGGTTGCAGCACTTGGAGAA
GGAGTATCCTTAGAAGCAAAGTTGTTAAGCAGGAAGGAAGCCTCTTTGCGCCAAAGGGAG
GCTGCACTGAAAGACGCAAAACAAGCCAAGAATGGGATAGATGTGGAACTTGCAAACCTC
TGTTCTAATGTTCAGAAAGCAAAAGATGACGCAGCTGCTGCTGTATATCAACTTCGAGGG
ACTGAATCTGAGGTTAAAACTCTACGCTTTATGACACAAAGGATGGTTTTAACCCAGAAT
GAGATGGAAGATGTTGTTCTTAAAAGATGCTGGCTTGCACGTTATTGGGGTTTAGCAGCT
CAGTTTGGCATTTGTGCAGATATTGCTGCTTCAAAACATGAGTACTGGTCATCCTTCGCA
CCTCTTCCTTTTGAATTGGTTATCTCTGCTGGACAAAAGGCAAAGGAAGAATTTTTGGAA
AAAGGTTATGACAATCCAGAGAGGGGTAATCTTGTTCAGGATTTGAATGATCTCACTGGA
GAAGGAAATATAGAAAGCATGCTTTCTGTTGAAATGGGCTTGAATGAACTTGTTTCCTTG
AAGGTTGAGGATGCCATAGTGCTTGCACTGGCTCATCAACGACGTCCAAACTCCACTCGA
ACATCAATTTCAGGTTTTTCTCTTCTCTGTTTCTTAAACATGTAA

Peptide Sequence

PEP ID

XP_016514386.1
PEP Infomation

PREDICTED: coiled-coil domain-containing protein SCD2-like [Nicotiana tabacum]
Sequence

MDRARTASPRQLRKWSSESGAAPTLTSGSSSPGRPHHHGRSSSVSGVMMSNIKRTQNVAA
KAAAQRLAQVMASQAASAGNDDDDDDNDDLGFRFAPPSFSRSNGTSATDNTNATYNTNAA
AIQSAKLNNNRSSSPLLARNFVEETPSSLRSTSAGRANVPTRPPSSIPSTRQPVKTPSPI
PPIEPPTNKLREKRFSPDLRQVNLKDTGDNRVASALHDELDMLQEENENLLGKLRGAEMS
YDEAEARVKELEKQVAALGEGVSLEAKLLSRKEASLRQREAALKDAKQAKNGIDVELANL
CSNVQKAKDDAAAAVYQLRGTESEVKTLRFMTQRMVLTQNEMEDVVLKRCWLARYWGLAA
QFGICADIAASKHEYWSSFAPLPFELVISAGQKAKEEFLEKGYDNPERGNLVQDLNDLTG
EGNIESMLSVEMGLNELVSLKVEDAIVLALAHQRRPNSTRTSISGFSLLCFLNM

Transcript Sequence

Gene sequence data has not been registered.